Poster Presentation The 47th Lorne Conference on Protein Structure and Function 2022

Towards the development of herbicides targeting lysine biosynthesis (#154)

Emily R. R. Mackie 1 , Andrew S. Barrow 1 , Santosh Panjikar 2 , Marie-Claire Giel 1 , Anthony R. Gendall 3 , Tatiana P. Soares da Costa 1
  1. La Trobe Institute for Molecular Science, La Trobe University, Bundoora, VIC 3086, Australia
  2. Australian Synchrotron, ANSTO, Clayton, VIC, Australia
  3. AgriBio Centre for Agri-biosciences, La Trobe University, Bundoora, VIC 3086, Australia

Herbicide resistance is one of the biggest threats to our natural environment and agricultural industry.1 The rapid emergence of herbicide-resistant weeds has been driven by repeated application of the same herbicides, combined with a lack of new herbicides entering the market in the past 30 years.2 Therefore, we urgently require herbicides with new modes of action to tackle the herbicide resistance crisis we are facing.3 Although many commercial herbicides inhibit the biosynthesis of amino acids in plants, the lysine biosynthesis pathway is yet to be exploited as a herbicide target.3,4 Our goal is therefore to validate lysine biosynthesis enzymes as herbicide targets and develop inhibitors of these enzymes as novel herbicide leads. To achieve this, we are characterising the structure and function of plant lysine biosynthesis enzymes using enzyme kinetic assays, circular dichroism spectroscopy, analytical ultracentrifugation and X-ray crystallography. We are developing small molecule inhibitors of several of these enzymes, with screening being conducted in vitro using biochemical assays, as well as in planta against Arabidopsis thaliana. The herbicidal efficacy of lead inhibitors against weeds is being validated against the most problematic weed in Australia, Lolium rigidum. The relationship between lead inhibitor mechanisms and physiological outcomes is being probed using X‑ray crystallography, toxicity assays, and systems biology. This work has the potential to provide novel herbicide modes of action to help combat the global herbicide resistance crisis.

  1. Heap, I. The International Herbicide-Resistant Weed Database. http://www.weedscience.org/Home.aspx (2020).
  2. Qu, R. Y. et al. Where are the new herbicides? Pest Manag. Sci. 77(6), 2620-2625 (2021).
  3. Hall, C. J., Mackie, E. R., Gendall, A. R., Perugini, M. A. & Soares da Costa, T. P. Review: amino acid biosynthesis as a target for herbicide development. Pest Manag. Sci. 76(12), 3896-3904 (2020).
  4. Soares da Costa, T. P. et al. Towards novel herbicide modes of action by inhibiting lysine biosynthesis in plants. Elife 10, 1–17 (2021).