Poster Presentation The 47th Lorne Conference on Protein Structure and Function 2022

Structural basis for antagonism of IGF1R by a viral insulin-like peptide (#226)

Nicholas S Kirk 1
  1. WEHI, Parkville, VIC, Australia

The recent discovery that viruses from the Iridoviridae family carry sequences encoding insulin-like proteins is astonishing, as such viral insulin-like proteins (VILPs) may be implicated in disease through their interaction with human insulin- or insulin-like growth factor receptors, or through their induction of an auto-immune response [1]. Critically, DNA sequences from these viruses have been detected in the human faecal virome and in circulating human blood, likely resulting from the ingestion of infected fish (the natural host) [1]. 

A particularly interesting viral insulin-like protein is that of lymphocystis disease virus-1 (LCDV-1). We term this protein "scLCDV1-VILP", reflecting that we have studied it as a single-chain ("sc") polypeptide analogous to human insulin-like growth factors (hIGF-I, -II), rather than as a double-chain polypeptide analogous to human insulin. scLCDV1-VILP binds to the human type 1 insulin-like receptor (hIGF-1R) with affinity approximately ten-fold lower than hIGF-I and is a partial agonist [1]. However, scLCDV1-VILP is a competitive antagonist of hIGF-1R at high concentrations [2]. Understanding the basis for such antagonism may have implications for the design of IGF-1R-specific therapeutics in the context of cancer, especially as scLCDV1-VILP has very limited ability to stimulate the insulin receptor [1]. 

We show here, using single-particle cryo-electron microscopy (cryoEM), that the antagonistic properties of scLCDV1-VILP arise from its non-engagement with the receptor's membrane-distal regions (termed "site 1b"). Indeed, single hIGF-I (or hIGF-II) crosslinking of the primary binding site to site 1b is required to effect the structural transitions in the receptor that bring about signal transduction [3; 4]. Our cryoEM structure reveals instead a dual primary-site liganded hIGF-1R homodimer, but neither scLCDV1-VILP engages site 1b and the receptor does not assume a signalling-active conformation. Data from chimeric  scLCDV1-VILP / hIGF-I studies then enable us to deduce a possible source of the VILP's inability to engage site 1b [2].

  1. Altindis, E., Cai, W., Sakaguchi, M., Zhang, F., GuoXiao, W., Liu, F., et al., 2018. Viral insulin-like peptides activate human insulin and IGF-1 receptor signaling: A paradigm shift for host-microbe interactions. Proc Natl Acad Sci U S A 115:2461-2466.
  2. Zhang, F., Altindis, E., Kahn, C.R., DiMarchi, R.D., Gelfanov, V., 2021. A viral insulin-like peptide is a natural competitive antagonist of the human IGF-1 receptor. Molecular Metabolism 53:101316.
  3. Li, J., Choi, E., Yu, H., Bai, X.C., 2019. Structural basis of the activation of type 1 insulin-like growth factor receptor. Nature Communications 10(1):4567.
  4. Xu, Y., Kirk, N.S., Venugopal, H., Margetts, M.B., Croll, T.I., Sandow, J.J., et al., 2020. How IGF-II Binds to the Human Type 1 Insulin-like Growth Factor Receptor. Structure 28(7):786-798.